[pagoda] Move project to Scala

This commit includes a few changes:
- The repository still uses Maven to manage dependency but it is now a
  Scala project.
- The code has been ported from OWLAPI 3.4.10 to 5.1.20
- A proof of concept program using both RSAComb and PAGOdA has been
  added.

4 files changed, 0 insertions, 53 deletions

diff --git a/src/org/semanticweb/karma2/exception/ConstraintException.java b/src/org/semanticweb/karma2/exception/ConstraintException.java
deleted file mode 100644
index d02e1b1..0000000
--- a/src/org/semanticweb/karma2/exception/ConstraintException.java
+++ /dev/null
@@ -1,17 +0,0 @@
-package org.semanticweb.karma2.exception;
-
-
-public class ConstraintException extends Exception {
-
-        /**
-         * 
-         */
-        private static final long serialVersionUID = -2358667126775918262L;
-
-        public ConstraintException(String string) {
-                super(string);
-        }
-
-        
-}
-
diff --git a/src/org/semanticweb/karma2/exception/IllegalInputOntologyException.java b/src/org/semanticweb/karma2/exception/IllegalInputOntologyException.java
deleted file mode 100644
index 18df25a..0000000
--- a/src/org/semanticweb/karma2/exception/IllegalInputOntologyException.java
+++ /dev/null
@@ -1,9 +0,0 @@
-package org.semanticweb.karma2.exception;
-
-public class IllegalInputOntologyException extends Exception {
-        
-        private static final long serialVersionUID = -2352640877361631466L;
-
-        public IllegalInputOntologyException(String msg) {}
-
-}
diff --git a/src/org/semanticweb/karma2/exception/IllegalInputQueryException.java b/src/org/semanticweb/karma2/exception/IllegalInputQueryException.java
deleted file mode 100644
index bb94cb7..0000000
--- a/src/org/semanticweb/karma2/exception/IllegalInputQueryException.java
+++ /dev/null
@@ -1,14 +0,0 @@
-package org.semanticweb.karma2.exception;
-
-public class IllegalInputQueryException extends Exception {
-
-        /**
-         * 
-         */
-        private static final long serialVersionUID = 1L;
-
-        public IllegalInputQueryException(String string) {
-                super(string);
-        }
-
-}
diff --git a/src/org/semanticweb/karma2/exception/QueryExecutionException.java b/src/org/semanticweb/karma2/exception/QueryExecutionException.java
deleted file mode 100644
index bb393ba..0000000
--- a/src/org/semanticweb/karma2/exception/QueryExecutionException.java
+++ /dev/null
@@ -1,13 +0,0 @@
-package org.semanticweb.karma2.exception;
-
-import java.util.concurrent.ExecutionException;
-
-public class QueryExecutionException extends ExecutionException {
-
-        private static final long serialVersionUID = 4082514276158055768L;
-
-        public QueryExecutionException(String msg) {
-                super(msg);
-        }
-        
-}