initial version

2 files changed, 116 insertions, 0 deletions

diff --git a/src/org/semanticweb/simpleETL/RDFHandlerWriter.java b/src/org/semanticweb/simpleETL/RDFHandlerWriter.java
new file mode 100644
index 0000000..e5e2e2a
--- /dev/null
+++ b/src/org/semanticweb/simpleETL/RDFHandlerWriter.java
@@ -0,0 +1,45 @@
+package org.semanticweb.simpleETL;
+import org.openrdf.model.Statement;
+import org.openrdf.rio.RDFHandler;
+import org.openrdf.rio.RDFHandlerException;
+import org.openrdf.rio.RDFWriter;
+
+
+public class RDFHandlerWriter implements RDFHandler {
+        protected RDFWriter m_writer;
+        protected boolean m_started;
+        
+        public RDFHandlerWriter(RDFWriter writer){
+                m_writer = writer;
+                m_started = false;
+        }
+
+        @Override
+        public void endRDF() throws RDFHandlerException {
+                // Do not end
+        }
+
+        @Override
+        public void handleComment(String arg0) throws RDFHandlerException {
+                m_writer.handleComment(arg0);
+                
+        }
+
+        @Override
+        public void handleNamespace(String arg0, String arg1) throws RDFHandlerException {
+                m_writer.handleNamespace(arg0, arg1);           
+        }
+
+        @Override
+        public void handleStatement(Statement arg0) throws RDFHandlerException {
+                m_writer.handleStatement(arg0);         
+        }
+
+        @Override
+        public void startRDF() throws RDFHandlerException {
+                if(!m_started) {
+                        m_started = true;
+                        m_writer.startRDF();
+                }               
+        }       
+}
diff --git a/src/org/semanticweb/simpleETL/SimpleETL.java b/src/org/semanticweb/simpleETL/SimpleETL.java
new file mode 100644
index 0000000..4d4a193
--- /dev/null
+++ b/src/org/semanticweb/simpleETL/SimpleETL.java
@@ -0,0 +1,71 @@
+package org.semanticweb.simpleETL;
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.FileOutputStream;
+import java.util.regex.Pattern;
+
+import org.openrdf.rio.RDFParser;
+import org.openrdf.rio.RDFWriter;
+import org.openrdf.rio.rdfxml.RDFXMLParser;
+import org.openrdf.rio.turtle.TurtleWriter;
+
+import uk.ac.ox.cs.pagoda.util.Utility;
+
+public class SimpleETL {
+        
+        protected final static String m_prefix_LUBM = "http://www.lehigh.edu/~zhp2/2004/0401/univ-bench.owl#";
+        protected final static String m_prefix_UOBM = "http://semantics.crl.ibm.com/univ-bench-dl.owl#";
+        protected final static String m_prefix_FLY= "http://www.virtualflybrain.org/ontologies/individual_neurons/FC_neuron_GF_an.owl#";
+
+        String m_prefix; 
+        String m_fileToImport;
+        String m_fileToExport; 
+        
+        public SimpleETL(String prefix, String fileToImport) {
+                m_prefix = prefix; 
+                m_fileToImport = fileToImport; 
+                m_fileToExport = m_fileToImport.replace(".owl", ".ttl"); 
+        }
+        
+        public SimpleETL(String prefix, String fileToImport, String outPath) {
+                m_prefix = prefix; 
+                m_fileToImport = fileToImport;
+                File file = new File(outPath); 
+                if (file.exists() && file.isDirectory())
+                        m_fileToExport = outPath + Utility.FILE_SEPARATOR + "data.ttl"; 
+                else 
+                        m_fileToExport = outPath; 
+//                              + Utility.FILE_SEPARATOR + m_fileToImport.substring(m_fileToImport.lastIndexOf(Utility.FILE_SEPARATOR), m_fileToImport.lastIndexOf(".")) + ".ttl"; 
+        }
+        
+        public void rewrite() throws Exception {
+//              RDFParser parser = new TurtleParser();
+                RDFParser parser = new RDFXMLParser(); 
+                
+                RDFWriter writer = new TurtleWriter(new FileOutputStream(m_fileToExport));
+                
+//              String m_fileToExport = m_fileToImport.replace(".owl", ".ntriple"); 
+//              RDFWriter writer = new NTriplesWriter(new FileOutputStream(m_fileToExport));
+                
+                RDFHandlerWriter multiHandler = new RDFHandlerWriter(writer);
+                parser.setRDFHandler(multiHandler);
+                File fileToImport = new File(m_fileToImport);
+                if(fileToImport.isDirectory()) {
+                        for(File file : fileToImport.listFiles()) {
+                                if(file.isFile() && (Pattern.matches(".*.owl", file.getName()) || Pattern.matches(".*.rdf", file.getName()))) {
+                                        Utility.logDebug("Parsing " + file.getName());
+                                        parser.parse(new FileInputStream(file), m_prefix);
+                                }
+                        }
+                }
+                else
+                        parser.parse(new FileInputStream(fileToImport), m_prefix);
+                writer.endRDF();
+                Utility.logInfo("SimpleETL rewriting DONE", 
+                                "additional ontology data is saved in " + m_fileToExport + "."); 
+        }
+        
+        public String getExportedFile() {
+                return m_fileToExport; 
+        }
+}