From 1013812b487bc438df49ec93ad9433438d5d6cf6 Mon Sep 17 00:00:00 2001 From: RncLsn Date: Fri, 26 Jun 2015 17:41:35 +0100 Subject: Summarisation before Skolemisation. Added Reactome testcase. --- .../cs/pagoda/global_tests/TestPagodaReactome.java | 26 ++++++++++++++++++++++ 1 file changed, 26 insertions(+) create mode 100644 test/uk/ac/ox/cs/pagoda/global_tests/TestPagodaReactome.java (limited to 'test/uk/ac/ox/cs/pagoda/global_tests/TestPagodaReactome.java') diff --git a/test/uk/ac/ox/cs/pagoda/global_tests/TestPagodaReactome.java b/test/uk/ac/ox/cs/pagoda/global_tests/TestPagodaReactome.java new file mode 100644 index 0000000..5c05b94 --- /dev/null +++ b/test/uk/ac/ox/cs/pagoda/global_tests/TestPagodaReactome.java @@ -0,0 +1,26 @@ +package uk.ac.ox.cs.pagoda.global_tests; + +import org.testng.annotations.Test; +import uk.ac.ox.cs.pagoda.Pagoda; +import uk.ac.ox.cs.pagoda.util.TestUtil; + +import java.io.IOException; +import java.nio.file.Paths; + +public class TestPagodaReactome { + + @Test(groups = {"light"}) + public void justExecute() throws IOException { + String ontoDir = TestUtil.getConfig().getProperty("ontoDir"); + + Pagoda.builder() + .ontology(Paths.get(ontoDir, "reactome/biopax-level3-processed.owl")) + .data(Paths.get(ontoDir, "reactome/data/sample_10.ttl")) + .query(Paths.get(ontoDir, "reactome/test.sparql")) + .classify(true) + .hermit(true) + .build() + .run(); + } + +} -- cgit v1.2.3