Add sbt plugin to create jar with dependences

Also update README.md with info on how to compile and run the program.

1 files changed, 34 insertions, 6 deletions

diff --git a/build.sbt b/build.sbt
index 860b064..4b774e7 100644
--- a/build.sbt
+++ b/build.sbt
@@ -1,10 +1,10 @@
 import Dependencies._
 
-ThisBuild / scalaVersion          := "2.13.4"
-ThisBuild / version               := "0.1.0"
-ThisBuild / organization          := "uk.ac.ox.cs.rsacomb"
-ThisBuild / organizationName      := "Department of Computer Science - University of Oxford"
-ThisBuild / organizationHomepage  := Some(url("https://www.cs.ox.ac.uk"))
+ThisBuild / scalaVersion := "2.13.4"
+ThisBuild / version := "0.1.0"
+ThisBuild / organization := "uk.ac.ox.cs.rsacomb"
+ThisBuild / organizationName := "Department of Computer Science - University of Oxford"
+ThisBuild / organizationHomepage := Some(url("https://www.cs.ox.ac.uk"))
 
 ThisBuild / scmInfo := Some(
   ScmInfo(
@@ -23,7 +23,9 @@ ThisBuild / scmInfo := Some(
 
 ThisBuild / description := "Re-implementation of the combined approach for CQ answering over RSA ontologies."
 // ThisBuild / licenses := List("Apache 2" -> new URL("http://www.apache.org/licenses/LICENSE-2.0.txt"))
-ThisBuild / homepage := Some(url("https://github.com/KRR-Oxford/RSA-combined-approach"))
+ThisBuild / homepage := Some(
+  url("https://github.com/KRR-Oxford/RSA-combined-approach")
+)
 
 lazy val root = (project in file("."))
   .settings(
@@ -36,3 +38,29 @@ lazy val root = (project in file("."))
       graphcore
     )
   )
+
+/** Exclude RDFox from the building process
+  *
+  * @see https://github.com/sbt/sbt-assembly#excluding-jars-and-files
+  * for different ways to exclude a specific package from the building
+  * process.
+  */
+assemblyExcludedJars in assembly := {
+  val cp = (fullClasspath in assembly).value
+  cp filter { _.data.getName == "JRDFox.jar" }
+}
+
+/** See these links for more info on merging strategies in
+  * `sbt-assembly`
+  *
+  *      https://github.com/sbt/sbt-assembly#merge-strategy
+  *      https://stackoverflow.com/a/55557287
+  */
+assemblyMergeStrategy in assembly := {
+  case "module-info.class" =>
+    MergeStrategy.discard
+  case x => {
+    val oldStrategy = (assemblyMergeStrategy in assembly).value
+    oldStrategy(x)
+  }
+}