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* Fix bug for data property translationFederico Igne2020-12-071-1/+1
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* Update README.mdFederico Igne2020-12-071-0/+3
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* Change ConjunctiveQuery constructors interfaceFederico Igne2020-12-075-21/+21
| | | | | One of the object constructor was returning an Option. It was weird to have a constructor that would not always return an object.
* Update answers pretty printerFederico Igne2020-12-072-4/+9
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* Change answer pritty printer to use CSV-like syntaxFederico Igne2020-12-062-18/+32
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* Temporarily ignore tests involving `cycle` computationFederico Igne2020-12-061-4/+4
| | | | | This is done because `cycle` is being reworked from a theoretical point of view at the moment.
* Add support for data property assertion axioms (OWLDataPropertyAssertionAxiom)Federico Igne2020-12-062-8/+95
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* Reintroduce previous implementation of `cycle`Federico Igne2020-12-061-29/+32
| | | | | At the time of writing, the naïve implementation of `cycle` produces too many rules, which are not efficiently handled by RDFox.
* Add method to retrieve diagnostics from RDFoxFederico Igne2020-12-061-0/+15
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* Fix axiom skolemizationFederico Igne2020-12-043-65/+59
| | | | | | Skolemization should be uniquely bound to the axiom being skolemized. When an axiom is a shortcut for a set of axioms, the skolemization strategy should be updated with the new axiom(s).
* Simplify duplication of skolemization strategyFederico Igne2020-12-041-6/+10
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* Rework skolemization strategiesFederico Igne2020-12-0411-236/+190
| | | | | | In particular `ConstantRSA` has been removed, since it was *not* a skolemization strategy. The case for extra atoms generation previously handled by `ConstantRSA` is not dealt with inside the RSA check.
* Merge branch 'rdfox-converter' into masterFederico Igne2020-12-029-162/+833
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| * Make filtering program generate/load facts as factsFederico Igne2020-12-023-16/+26
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| * Move datalog rules generation for RSA check to new RDFox generatorFederico Igne2020-12-021-28/+47
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| * Fix tests failing due to recent changesFederico Igne2020-12-022-39/+86
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| * Adapt canonical model computation to new RDFox converterFederico Igne2020-12-023-118/+105
| | | | | | | | | | When it comes to the canonical model, now facts are imported as facts in RDFox.
| * Unify upload of rules and facts to RDFox datastoreFederico Igne2020-12-021-4/+24
| | | | | | | | This will also help if/when we are implementing transactions.
| * Add implicit convertion to Java CollectionsFederico Igne2020-12-021-0/+4
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| * Add alternative conversion of axioms using switch-casesFederico Igne2020-12-012-0/+584
|/ | | | | | This is part of an effort to move away from the Java-style visitor pattern pushed by the OWLAPI and RDFox. Using a Scala approach will allow us to be more flexible in the long run.
* Temporary add tests folder to .gitignoreFederico Igne2020-12-011-0/+1
| | | | This is until the testing suite is ready to run on the server.
* Add implicit convertion from Java Sets/Collections to ListsFederico Igne2020-12-011-0/+8
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* Cleanup converters codeFederico Igne2020-12-013-6/+5
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* Fix bug on argument validationFederico Igne2020-11-301-1/+1
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* Add test data (ABox) for LUBM (manually merged)Federico Igne2020-11-271-0/+137381
| | | | | | | | | | | This data has been generated with the following $ java edu.lehigh.swat.bench.uba.Generator -univ 1 -index 0 -seed 0 -onto "http://swat.cse.lehigh.edu/onto/univ-bench.owl" and manually merged. Note that merging ontologies is not required anymore and the system will take care of it.
* Add ability to pass multiple ontology files on the commandlineFederico Igne2020-11-272-15/+18
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* Add support for data property domain axiomsFederico Igne2020-11-274-62/+116
| | | | Also reintroduce data property axioms in LUBM
* Add LUBM ontology to the examplesFederico Igne2020-11-262-0/+1468
| | | | Both the original ontology and the modified ontology are included.
* Add ability to convert domain/range axioms for object propertiesFederico Igne2020-11-261-3/+29
| | | | | They have a straightforward translation into the supported normal form proposed in the paper.
* Turn implicit classes wrappers into objectsFederico Igne2020-11-246-12/+15
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* Rename `RDFoxHelpers` to `RDFoxUtil`Federico Igne2020-11-246-21/+21
| | | | For a more consistent naming.
* Rework filtering program generationFederico Igne2020-11-243-340/+129
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* Include BCQ case in filtering program generationFederico Igne2020-11-233-305/+316
| | | | The FilteringProgram module has been slightly reworked.
* Remove duplicate creation of RDFox datastoresFederico Igne2020-11-233-32/+20
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* Rename `boolean` as `bcq`Federico Igne2020-11-234-12/+11
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* Add Acknowledgements/Credits sections to README.mdFederico Igne2020-11-231-0/+8
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* Update RSAOntology interface for query answeringFederico Igne2020-11-202-28/+61
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* Simplify workflow for query executionFederico Igne2020-11-204-218/+130
| | | | Input query is now read from file.
* Integrate new ConjunctiveQuery in filtering program computationFederico Igne2020-11-193-34/+15
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* Add wrapper class for (boolean) conjunctive queriesFederico Igne2020-11-199-95/+466
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* Move NI instantiation in FilteringProgramFederico Igne2020-11-195-45/+39
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* Update README.mdFederico Igne2020-11-191-3/+3
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* Update README.mdFederico Igne2020-11-191-7/+10
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* Update README.mdFederico Igne2020-11-191-5/+32
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* Reorganize project with Java-like folder structureFederico Igne2020-11-1820-41/+56
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* Rename internal predicate "EquivTo" to "congruent"Federico Igne2020-11-183-13/+13
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* Change IRI prefix for internal resourcesFederico Igne2020-11-182-9/+5
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* Rework RSA as a utility objectFederico Igne2020-11-1818-565/+591
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* Remove implicit RSAOntology conversionFederico Igne2020-11-177-665/+624
| | | | | | This was causing problems without giving any significant advantage. Now it will be easier to refactor classes like RSA, RSAOntology, CanonicalModel.
* Rename RDFTriple to RSAAtomFederico Igne2020-11-171-0/+0
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