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* Drop filtering tuple table when done with a queryFederico Igne2021-11-012-84/+11
| | | | | This avoids running out of memory on RDFox side when executing a use amount of queries.
* Finalise dbpedia functional testingFederico Igne2021-10-308-12/+97
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* Fix verbose printing of canonical model factsFederico Igne2021-10-221-1/+1
| | | | Printing a fact does not add a dot at the end on the line.
* Serialise and silence output in testsFederico Igne2021-10-213-3/+6
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* Rework RDFox simulation to be more modularFederico Igne2021-10-204-16/+91
| | | | This will help with faster testing and debugging.
* Add script to load debug data to RDFoxFederico Igne2021-10-053-9/+16
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* Add substitution rules in equality axiomatisationFederico Igne2021-10-041-2/+29
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* Fix issue where not all roles where considered for top axiomatisationFederico Igne2021-10-046-41/+56
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* Tag some tests as slowFederico Igne2021-10-041-2/+15
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* Make file logging lazyFederico Igne2021-10-042-2/+2
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* Add file output on verbose log levelFederico Igne2021-10-032-6/+15
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* Rework CLI configsFederico Igne2021-10-032-124/+164
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* Fix functional testsFederico Igne2021-10-031-1/+1
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* Fix prefix in dependency graphFederico Igne2021-10-031-1/+1
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* Introduce functional testsFederico Igne2021-10-032-3/+54
| | | | | These tests will check correctness of the overall system across versions. We should add more tests for know ontologies.
* Assign queries integer identifierFederico Igne2021-10-032-12/+14
| | | | | | | | | | | The ID needs to be specified at creation time or in a query file preceeding the query with the syntax ``` ^[Query<id>] ``` where `<id>` is the id of the query.
* Temporary comment unit testFederico Igne2021-10-034-207/+207
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* Move to os-lib for filesystem operationsFederico Igne2021-10-034-38/+51
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* Fix compilation errorsFederico Igne2021-10-034-23/+27
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* Allow querying of a single queryFederico Igne2021-10-021-18/+36
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* Expose logger level to CLIFederico Igne2021-10-022-5/+24
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* Rework revides filtering program computation to use named graphsFederico Igne2021-10-027-262/+254
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* Rework naive filtering program computation to use named graphsFederico Igne2021-10-017-166/+298
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* Make canonical model generation parametric over named graphFederico Igne2021-10-016-83/+141
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* Refactor query answering to use named graphsFederico Igne2021-09-305-82/+148
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* Write answers to output fileFederico Igne2021-09-292-3/+16
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* Always use internal equality instead of SAME_ASFederico Igne2021-09-291-2/+2
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* Add import of multiple queriesFederico Igne2021-09-293-40/+70
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* Add JSON format for CQ answersFederico Igne2021-09-292-4/+21
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* Update RDFox library to 5.2.1Federico Igne2021-09-013-9/+12
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* Add new fresh data factoryFederico Igne2021-08-0614-376/+455
| | | | This will help write more significant test.
* Extend converter to RDFox rules to handle property chain axiomsFederico Igne2021-08-032-66/+36
| | | | | | | | | The converter to RDFox datalog rules shouldn't worry about which axiom is supported or not (it should be a job of the approximation algorithm or of a previous step). Now the converter tries its best to convert anything that makes sense in datalog. Also upperbound is ready for testing.
* Update normalizer to handle additional OWL axiomsFederico Igne2021-08-021-111/+97
| | | | | | Also the normalizer should not distinguish ALCHOIQ axioms from non-ALCHOIQ axioms, and should try its best to return a normalised axiom.
* Implement fine-grained constant skolemization in upperboundFederico Igne2021-07-291-100/+128
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* Change spelling: LowerBound to LowerboundFederico Igne2021-07-292-11/+11
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* Add skeleton for upperbound computationFederico Igne2021-07-271-0/+183
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* Merge branch 'approximation'v0.2.0Federico Igne2021-07-279-415/+886
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| * Rework class structure to match more general workflowFederico Igne2021-07-273-13/+15
| | | | | | | | | | | | | | | | The major change is the introduction of a new class Ontology (superclass of RSAOntology) that contains all those operation that we would like to perform on *any* OWL 2 ontology. Approximation is also generic on the return type, allowing for example intermediate steps (or chaining of approximations).
| * Fix file namingFederico Igne2021-07-223-2/+2
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| * Remove normalization step from lowerbound computationFederico Igne2021-07-222-18/+15
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| * Review main workflowFederico Igne2021-07-224-17/+61
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| * Make approximation generic over returned typeFederico Igne2021-07-223-38/+33
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| * Move some generic commands from RSAOntology to OntologyFederico Igne2021-07-223-259/+248
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| * Generalize dependency graph generationFederico Igne2021-07-208-119/+182
| | | | | | | | | | | | | | | | | | | | The code to generate the dependency graph has been moved in the companion object of the generic OWL 2 ontology wrapper Ontology. This signals that we could potentially build a dependency graph for any ontology (and not only RSA ontology). Moreover, a dependency graph can be build for an Ontology object or an arbitrary TBox and Abox.
| * Add generic Ontology wrapper for common tasksFederico Igne2021-07-201-0/+90
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| * Merge branch 'master' into approximationFederico Igne2021-06-234-14/+31
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| * | Fix minor compilation errorsFederico Igne2021-06-014-83/+106
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| * | Multiple fixesFederico Igne2021-05-314-54/+80
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| * | Add scafolding for generic approximation supportFederico Igne2021-05-313-143/+385
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* | | Merge branch 'master' of github.com:KRR-Oxford/RSA-combined-approachFederico Igne2021-06-3031-0/+496
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