Configured Maven and improved executable class and tests.

4 files changed, 84 insertions, 0 deletions

diff --git a/src/resources/fly.properties b/src/resources/fly.properties
new file mode 100644
index 0000000..88c85c3
--- /dev/null
+++ b/src/resources/fly.properties
@@ -0,0 +1,19 @@
+#ONTOLOGY variable points to the file that stores ontology of interest
+ONTOLOGY=data/fly/fly_anatomy_XP_with_GJ_FC_individuals.owl
+#ONTOLOGY=data/fly/fbbt_vfb_ind_pr_nr.owl
+
+#QUERY variable points to the file that stores all queries
+QUERY=data/fly/fly.sparql
+#QUERY=data/fly/test.sparql
+
+#ANSWER variable points to the file to output all answers 
+#ANSWER=data/fly/fly.ans
+
+#TO_CLASSIFY switch for the optimisation to specify if the ontology is first classified by HermiT
+TO_CLASSIFY=false
+
+#CALL_HERMIT variable to specify if HermiT is called or not
+CALL_HERMIT=true
+
+#SHELL_MODE to enable query execution from console input
+SHELL_MODE=false
\ No newline at end of file
diff --git a/src/resources/log4j.properties b/src/resources/log4j.properties
new file mode 100644
index 0000000..3bfd32e
--- /dev/null
+++ b/src/resources/log4j.properties
@@ -0,0 +1,25 @@
+log = .
+log4j.rootLogger=DEBUG, CONSOLE, FILE_LAST, FILE
+
+log4j.appender.CONSOLE=org.apache.log4j.ConsoleAppender
+log4j.appender.CONSOLE.layout=org.apache.log4j.PatternLayout
+log4j.appender.CONSOLE.layout.ConversionPattern=%d{yyyy-MM-dd HH:mm:ss} %c - %m%n
+log4j.appender.CONSOLE.Target=System.out
+log4j.appender.CONSOLE.Threshold=INFO
+
+log4j.appender.FILE_LAST=org.apache.log4j.RollingFileAppender
+log4j.appender.FILE_LAST.File=${log}/pagoda_last_only.log
+log4j.appender.FILE_LAST.MaxFileSize=10MB
+log4j.appender.FILE_LAST.MaxBackupIndex=3
+log4j.appender.FILE_LAST.layout=org.apache.log4j.PatternLayout
+log4j.appender.FILE_LAST.layout.conversionPattern=[%5p] %d{yyyy-MM-dd HH:mm:ss} %c - %m%n
+log4j.appender.FILE_LAST.append=false
+log4j.appender.FILE_LAST.Threshold=DEBUG
+
+log4j.appender.FILE=org.apache.log4j.RollingFileAppender
+log4j.appender.FILE.File=${log}/pagoda.log
+log4j.appender.FILE.MaxFileSize=10MB
+log4j.appender.FILE.MaxBackupIndex=3
+log4j.appender.FILE.layout=org.apache.log4j.PatternLayout
+log4j.appender.FILE.layout.conversionPattern=[%5p] %d{yyyy-MM-dd HH:mm:ss} %c - %m%n
+log4j.appender.FILE.Threshold=DEBUG
\ No newline at end of file
diff --git a/src/resources/lubm.properties b/src/resources/lubm.properties
new file mode 100644
index 0000000..73ed470
--- /dev/null
+++ b/src/resources/lubm.properties
@@ -0,0 +1,20 @@
+#DATA variable points to the file that stores data
+DATA=data/lubm/lubm1.ttl
+
+#ONTOLOGY variable points to the file that stores ontology of interest
+ONTOLOGY=data/lubm/univ-bench.owl
+
+#QUERY variable points to the file that stores all queries
+QUERY=data/lubm/lubm.sparql
+
+#ANSWER variable points to the file to output all answers 
+#ANSWER=data/lubm/lubm.ans
+
+#TO_CLASSIFY switch for the optimisation to specify if the ontology is first classified by HermiT
+TO_CLASSIFY=true
+
+#CALL_HERMIT variable to specify if HermiT is called or not
+CALL_HERMIT=true
+
+#SHELL_MODE to enable query execution from console input
+SHELL_MODE=false
\ No newline at end of file
diff --git a/src/resources/uobm.properties b/src/resources/uobm.properties
new file mode 100644
index 0000000..acbe78e
--- /dev/null
+++ b/src/resources/uobm.properties
@@ -0,0 +1,20 @@
+#DATA variable points to the file that stores data
+DATA=data/uobm/uobm1.ttl
+
+#ONTOLOGY variable points to the file that stores ontology of interest
+ONTOLOGY=data/uobm/univ-bench-dl.owl
+
+#QUERY variable points to the file that stores all queries
+QUERY=data/uobm/uobm.sparql
+
+#ANSWER variable points to the file to output all answers 
+#ANSWER=data/uobm/uobm.ans
+
+#TO_CLASSIFY switch for the optimisation to specify if the ontology is first classified by HermiT
+TO_CLASSIFY=true
+
+#CALL_HERMIT variable to specify if HermiT is called or not
+CALL_HERMIT=true
+
+#SHELL_MODE to enable query execution from console input
+SHELL_MODE=false
\ No newline at end of file