[pagoda] Move project to Scala

This commit includes a few changes:
- The repository still uses Maven to manage dependency but it is now a
  Scala project.
- The code has been ported from OWLAPI 3.4.10 to 5.1.20
- A proof of concept program using both RSAComb and PAGOdA has been
  added.

1 files changed, 0 insertions, 37 deletions

diff --git a/src/uk/ac/ox/cs/pagoda/endomorph/Clique.java b/src/uk/ac/ox/cs/pagoda/endomorph/Clique.java
deleted file mode 100644
index 9b0d88e..0000000
--- a/src/uk/ac/ox/cs/pagoda/endomorph/Clique.java
+++ /dev/null
@@ -1,37 +0,0 @@
-package uk.ac.ox.cs.pagoda.endomorph;
-
-import uk.ac.ox.cs.pagoda.summary.NodeTuple;
-
-import java.util.Collection;
-import java.util.HashSet;
-import java.util.Set;
-
-public class Clique {
-        NodeTuple representative; 
-        Set<NodeTuple> nodeTuples = null; 
-        
-        public Clique(NodeTuple u) {
-                nodeTuples = new HashSet<NodeTuple>(); 
-                representative = u;
-                nodeTuples.add(u);
-        }
-
-        public boolean addNodeTuple(NodeTuple nodeTuple) {
-                return nodeTuples.add(nodeTuple); 
-        }
-        
-        public NodeTuple getRepresentative() {
-                return representative; 
-        }
-        
-        @Override
-        public String toString() {
-                return representative.toString(); 
-        }
-
-        public Collection<NodeTuple> getNodeTuples() {
-                return nodeTuples; 
-        }
-        
-}
-