[pagoda] Move project to Scala

This commit includes a few changes:
- The repository still uses Maven to manage dependency but it is now a
  Scala project.
- The code has been ported from OWLAPI 3.4.10 to 5.1.20
- A proof of concept program using both RSAComb and PAGOdA has been
  added.

1 files changed, 0 insertions, 26 deletions

diff --git a/test/resources/MainTests.xml b/test/resources/MainTests.xml
deleted file mode 100644
index fdecc72..0000000
--- a/test/resources/MainTests.xml
+++ /dev/null
@@ -1,26 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE suite SYSTEM "http://testng.org/testng-1.0.dtd" >
-
-<suite name="MainTests">
-    <test name="main">
-        <groups>
-            <run>
-                <!--<include name="correctness"/>-->
-                <!--<include name="light"/>-->
-                <!--<include name="justExecute"/>-->
-                <!--<exclude name="heavy"/>-->
-                <!--<include name="nonOriginal"/>-->
-                <include name="existential"/>
-            </run>
-        </groups>
-        <classes>
-            <!--<class name="uk.ac.ox.cs.pagoda.global_tests.TestPagodaReactome"/>-->
-            <!--<class name="uk.ac.ox.cs.pagoda.global_tests.TestPagodaUOBM"/>-->
-            <!--<class name="uk.ac.ox.cs.pagoda.global_tests.TestPagodaLUBM"/>-->
-            <!--Fly does not terminate: query-5 looks really hard-->
-            <class name="uk.ac.ox.cs.pagoda.global_tests.TestPagodaFLY"/>
-            <!--<class name="uk.ac.ox.cs.pagoda.global_tests.SkolemisationTests"/>-->
-            <!--<class name="uk.ac.ox.cs.pagoda.util.SimpleProgressBarTester" />-->
-        </classes>
-    </test>
-</suite>
\ No newline at end of file