1 files changed, 0 insertions, 86 deletions

diff --git a/test/uk/ac/ox/cs/data/AtomicQueryGenerator.java b/test/uk/ac/ox/cs/data/AtomicQueryGenerator.java
deleted file mode 100644
index d271e87..0000000
--- a/test/uk/ac/ox/cs/data/AtomicQueryGenerator.java
+++ /dev/null
@@ -1,86 +0,0 @@
-package uk.ac.ox.cs.data;
-
-import org.semanticweb.owlapi.model.OWLClass;
-import org.semanticweb.owlapi.model.OWLDataFactory;
-import org.semanticweb.owlapi.model.OWLObjectProperty;
-import org.semanticweb.owlapi.model.OWLOntology;
-import org.semanticweb.owlapi.model.OWLOntologyManager;
-
-import uk.ac.ox.cs.pagoda.owl.OWLHelper;
-import uk.ac.ox.cs.pagoda.tester.PagodaTester;
-import uk.ac.ox.cs.pagoda.util.Utility;
-
-public class AtomicQueryGenerator {
-        
-        public static final String template = //"^[query@ID]" + Utility.LINE_SEPARATOR +  
-                "PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>" + Utility.LINE_SEPARATOR + 
-                "SELECT ?X" + Utility.LINE_SEPARATOR +
-                "WHERE {" + Utility.LINE_SEPARATOR + 
-                "?X rdf:type <@CLASS>" + Utility.LINE_SEPARATOR + 
-                "}"; 
-        
-        public static String outputFile = "output/atomic_fly.sparql"; 
-
-        public static void main(String[] args) throws Exception {
-                if (args.length == 0) {
-//                      args = new String[] { "/home/yzhou/backup/20141212/univ-bench-dl-queries.owl"}; 
-                        args = new String[] { PagodaTester.onto_dir + "fly/fly-all-in-one_rolledUp.owl"}; 
-//                      args = new String[] { PagodaTester.onto_dir + "dbpedia/integratedOntology-all-in-one-minus-datatype.owl" }; 
-//                      args = new String[] { PagodaTester.onto_dir + "npd/npd-all-minus-datatype.owl" }; 
-//                      args = new String[] { PagodaTester.onto_dir + "bio2rdf/chembl/cco-noDPR.ttl" }; 
-//                      args = new String[] { PagodaTester.onto_dir + "bio2rdf/reactome/biopax-level3-processed.owl" }; 
-//                      args = new String[] { PagodaTester.onto_dir + "bio2rdf/uniprot/core-processed-noDis.owl" }; 
-                }
-                
-//              OWLOntology ontology = OWLHelper.getMergedOntology(args[0], null);
-//              OWLHelper.correctDataTypeRangeAxioms(ontology); 
-                OWLOntology ontology = OWLHelper.loadOntology(args[0]); 
-                
-                OWLOntologyManager manager = ontology.getOWLOntologyManager(); 
-                OWLDataFactory factory = manager.getOWLDataFactory();
-//              manager.saveOntology(ontology, new FileOutputStream(args[0].replace(".owl", "_owlapi.owl")));
-                
-                if (outputFile != null)
-                        Utility.redirectCurrentOut(outputFile); 
-                
-                int queryID = 0; 
-                for (OWLClass cls: ontology.getClassesInSignature(true)) {
-                        if (cls.equals(factory.getOWLThing()) || cls.equals(factory.getOWLNothing()))
-                                continue; 
-                        if (!cls.toStringID().contains("Query")) continue; 
-                        System.out.println("^[Query" + ++queryID + "]"); 
-                        System.out.println(template.replace("@CLASS", cls.toStringID())); 
-                        System.out.println(); 
-                }
-                
-                for (OWLOntology onto: ontology.getImportsClosure())
-                        for (OWLObjectProperty prop: onto.getObjectPropertiesInSignature()) {
-//                              if (!prop.toStringID().contains("Query")) continue; 
-                                System.out.println("^[Query" + ++queryID + "]");
-                                System.out.println("SELECT ?X ?Y"); 
-                                System.out.println("WHERE {");
-                                System.out.println("?X <" + prop.toStringID() + "> ?Y ."); 
-                                System.out.println("}");
-                                System.out.println();                                   
-                        }
-                
-                String[] answerVars = new String[] {"?X", "?Y"}; 
-                
-                for (OWLOntology onto: ontology.getImportsClosure())
-                        for (OWLObjectProperty prop: onto.getObjectPropertiesInSignature()) {
-//                              if (!prop.toStringID().contains("Query")) continue; 
-                                for (int i = 0; i < answerVars.length; ++i) {
-                                        System.out.println("^[Query" + ++queryID + "]");
-                                        System.out.println("SELECT " + answerVars[i]); 
-                                        System.out.println("WHERE {");
-                                        System.out.println("?X <" + prop.toStringID() + "> ?Y ."); 
-                                        System.out.println("}");
-                                        System.out.println();                                   
-                                }
-                        }
-                
-                if (outputFile != null)
-                        Utility.closeCurrentOut();
-        }
-
-}