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1package uk.ac.ox.cs.pagoda.global_tests;
2
3import org.testng.annotations.Test;
4import uk.ac.ox.cs.pagoda.Pagoda;
5import uk.ac.ox.cs.pagoda.util.TestUtil;
6
7import java.io.IOException;
8import java.nio.file.Paths;
9
10public class TestPagodaReactome {
11
12 @Test(groups = {"light"})
13 public void justExecute() throws IOException {
14 String ontoDir = TestUtil.getConfig().getProperty("ontoDir");
15
16 Pagoda.builder()
17 .ontology(Paths.get(ontoDir, "reactome/biopax-level3-processed.owl"))
18 .data(Paths.get(ontoDir, "reactome/data/sample_10.ttl"))
19 .query(Paths.get(ontoDir, "reactome/test.sparql"))
20 .classify(true)
21 .hermit(true)
22 .build()
23 .run();
24 }
25
26}