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package uk.ac.ox.cs.data;
import org.semanticweb.owlapi.model.OWLClass;
import org.semanticweb.owlapi.model.OWLDataFactory;
import org.semanticweb.owlapi.model.OWLObjectProperty;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.model.OWLOntologyManager;
import uk.ac.ox.cs.pagoda.owl.OWLHelper;
import uk.ac.ox.cs.pagoda.tester.PagodaTester;
import uk.ac.ox.cs.pagoda.util.Utility;
public class AtomicQueryGenerator {
public static final String template = //"^[query@ID]" + Utility.LINE_SEPARATOR +
"PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>" + Utility.LINE_SEPARATOR +
"SELECT ?X" + Utility.LINE_SEPARATOR +
"WHERE {" + Utility.LINE_SEPARATOR +
"?X rdf:type <@CLASS>" + Utility.LINE_SEPARATOR +
"}";
public static String outputFile = "output/atomic_fly.sparql";
public static void main(String[] args) throws Exception {
if (args.length == 0) {
// args = new String[] { "/home/yzhou/backup/20141212/univ-bench-dl-queries.owl"};
args = new String[] { PagodaTester.onto_dir + "fly/fly-all-in-one_rolledUp.owl"};
// args = new String[] { PagodaTester.onto_dir + "dbpedia/integratedOntology-all-in-one-minus-datatype.owl" };
// args = new String[] { PagodaTester.onto_dir + "npd/npd-all-minus-datatype.owl" };
// args = new String[] { PagodaTester.onto_dir + "bio2rdf/chembl/cco-noDPR.ttl" };
// args = new String[] { PagodaTester.onto_dir + "bio2rdf/reactome/biopax-level3-processed.owl" };
// args = new String[] { PagodaTester.onto_dir + "bio2rdf/uniprot/core-processed-noDis.owl" };
}
// OWLOntology ontology = OWLHelper.getMergedOntology(args[0], null);
// OWLHelper.correctDataTypeRangeAxioms(ontology);
OWLOntology ontology = OWLHelper.loadOntology(args[0]);
OWLOntologyManager manager = ontology.getOWLOntologyManager();
OWLDataFactory factory = manager.getOWLDataFactory();
// manager.saveOntology(ontology, new FileOutputStream(args[0].replace(".owl", "_owlapi.owl")));
if (outputFile != null)
Utility.redirectCurrentOut(outputFile);
int queryID = 0;
for (OWLClass cls: ontology.getClassesInSignature(true)) {
if (cls.equals(factory.getOWLThing()) || cls.equals(factory.getOWLNothing()))
continue;
if (!cls.toStringID().contains("Query")) continue;
System.out.println("^[Query" + ++queryID + "]");
System.out.println(template.replace("@CLASS", cls.toStringID()));
System.out.println();
}
for (OWLOntology onto: ontology.getImportsClosure())
for (OWLObjectProperty prop: onto.getObjectPropertiesInSignature()) {
// if (!prop.toStringID().contains("Query")) continue;
System.out.println("^[Query" + ++queryID + "]");
System.out.println("SELECT ?X ?Y");
System.out.println("WHERE {");
System.out.println("?X <" + prop.toStringID() + "> ?Y .");
System.out.println("}");
System.out.println();
}
String[] answerVars = new String[] {"?X", "?Y"};
for (OWLOntology onto: ontology.getImportsClosure())
for (OWLObjectProperty prop: onto.getObjectPropertiesInSignature()) {
// if (!prop.toStringID().contains("Query")) continue;
for (int i = 0; i < answerVars.length; ++i) {
System.out.println("^[Query" + ++queryID + "]");
System.out.println("SELECT " + answerVars[i]);
System.out.println("WHERE {");
System.out.println("?X <" + prop.toStringID() + "> ?Y .");
System.out.println("}");
System.out.println();
}
}
if (outputFile != null)
Utility.closeCurrentOut();
}
}
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