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/*
* Copyright 2020, 2021 KRR Oxford
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package uk.ac.ox.cs.rsacomb.sparql
import org.scalatest.{Inspectors, OptionValues}
import org.scalatest.flatspec.AnyFlatSpec
import org.scalatest.matchers.should.Matchers
import tech.oxfordsemantic.jrdfox.logic.expression.Variable
object ConjunctiveQuerySpec {
val cq0 = """
PREFIX : <http://example.com/rsa_example.owl#>
SELECT ?X
WHERE {
?X a :D ;
:R ?Y .
?Y :S ?Z .
?Z a :D .
}
"""
val cq1 = """
PREFIX : <http://example.com/rsa_example.owl#>
SELECT *
WHERE {
?X a :D ;
:R ?Y .
?Y :S ?Z .
?Z a :D .
}
"""
val cq2 = """
PREFIX : <http://slegger.gitlab.io/slegge-obda/ontology/subsurface-exploration#>
SELECT *
WHERE {
?w a :Wellbore ;
:wellboreDocument ?doc .
?doc :hasURL ?document_hyperlink
}
"""
val cq3 = """
PREFIX : <http://slegger.gitlab.io/slegge-obda/ontology/subsurface-exploration#>
SELECT ?wellbore ?formation_pressure
WHERE {
?w a :Wellbore ;
:name ?wellbore ;
:hasFormationPressure ?fp .
?fp :valueInStandardUnit ?formation_pressure
}
"""
val cq4 = """
PREFIX : <http://slegger.gitlab.io/slegge-obda/ontology/subsurface-exploration#>
SELECT *
WHERE {
?w a :Wellbore ;
:hasGeochemicalMeasurement ?measurement .
?measurement :cgType ?cgtype ;
:peakName ?peakType ;
:peakHeight ?peak_height ;
:peakAmount ?peak_amount
}
"""
val cq5 = """
PREFIX : <http://slegger.gitlab.io/slegge-obda/ontology/subsurface-exploration#>
SELECT ?wellbore ?unit_name ?discovery
WHERE {
?w a :Wellbore ;
:name ?wellbore ;
:hasWellboreInterval ?c_int ;
:hasWellboreInterval ?f_int .
?c_int :hasUnit ?c_unit .
?c_unit :name ?unit_name .
?f_int a :FluidZone ;
:name ?discovery ;
:overlapsWellboreInterval ?c_int
}
"""
val cq6 = """
PREFIX : <http://slegger.gitlab.io/slegge-obda/ontology/subsurface-exploration#>
SELECT DISTINCT ?wellbore ?content
WHERE {
?w a :Wellbore ;
:name ?wellbore ;
:hasWellboreInterval ?int .
?int a :FluidZone ;
:fluidZoneContent ?content
}
"""
val cq7 = """
PREFIX : <http://slegger.gitlab.io/slegge-obda/ontology/subsurface-exploration#>
SELECT ?wName ?sample ?porosity ?top_depth_md ?bot_depth_md
WHERE {
?w a :Wellbore ;
:name ?wName ;
:hasWellboreInterval ?z .
?z :hasUnit ?u .
?u :name ?strat_unit_name .
?wellbore :hasWellboreInterval ?cored_int .
?c :extractedFrom ?cored_int ;
:hasCoreSample ?sample .
?sample :hasDepth ?sample_depth .
?sample_depth
:inWellboreInterval ?z .
?sample :hasPorosity ?p .
?p :valueInStandardUnit ?porosity .
?z :hasTopDepth ?top .
?top a :MeasuredDepth ;
:valueInStandardUnit ?top_depth_md .
?z :hasBottomDepth ?bot .
?bot a :MeasuredDepth ;
:valueInStandardUnit ?bot_depth_md
}
"""
val bcq0 = """
PREFIX : <http://example.com/scrubs/casting/>
ASK {
:turk a :Doctor ;
:married ?X .
?X a :Nurse .
}
"""
val queries =
List(cq0, cq1, cq2, cq3, cq4, cq5, cq6, cq7, bcq0)
}
class ConjunctiveQuerySpec
extends AnyFlatSpec
with Matchers
with Inspectors
with OptionValues {
import ConjunctiveQuerySpec._
// "A conjunctive query" should "result in a `ConjunctiveQuery` instance" in {
// ConjunctiveQuery.parse(cq0) shouldBe defined
// }
// "A boolean conjunctive query" should "result in a `ConjunctiveQuery` instance" in {
// ConjunctiveQuery.parse(bcq0) shouldBe defined
// }
// "A query with proper SELECT defined" should "not be a BCQ" in {
// ConjunctiveQuery.parse(cq0).value should not be 'bcq
// }
// "A query with a \"*\" SELECT" should "not be a BCQ" in {
// ConjunctiveQuery.parse(cq1).value should not be 'bcq
// }
// "An ASK query" should "not be a BCQ" in {
// ConjunctiveQuery.parse(bcq0).value shouldBe 'bcq
// }
// "Queries" should "have distinct answer and bounded variables" in {
// for (q <- queries) {
// val cq = ConjunctiveQuery.parse(q)
// forAll(cq.value.answer) { v => cq.value.bounded should not contain v }
// forAll(cq.value.bounded) { v => cq.value.answer should not contain v }
// }
// }
// "CQ0" should "have {?obj, ?pred} as bounded variables" in {
// ConjunctiveQuery.parse(cq0).value.bounded should contain theSameElementsAs
// List(
// Variable.create("Y"),
// Variable.create("Z")
// )
// }
// "CQ1" should "have no bounded variable" in {
// ConjunctiveQuery.parse(cq1).value.bounded shouldBe empty
// }
// "CQ2" should "have no bounded variable" in {
// ConjunctiveQuery.parse(cq2).value.bounded shouldBe empty
// }
// "CQ3" should "have {?w, ?fp} as bounded variables" in {
// ConjunctiveQuery.parse(cq3).value.bounded should contain theSameElementsAs
// List(
// Variable.create("w"),
// Variable.create("fp")
// )
// }
// "CQ4" should "have no bounded variable" in {
// ConjunctiveQuery.parse(cq4).value.bounded shouldBe empty
// }
// "CQ5" should "have a non-empty bounded set" in {
// ConjunctiveQuery.parse(cq5).value.bounded should contain theSameElementsAs
// List(
// Variable.create("w"),
// Variable.create("c_int"),
// Variable.create("f_int"),
// Variable.create("c_unit")
// )
// }
// "CQ6" should "have a non-empty bounded set" in {
// ConjunctiveQuery.parse(cq6).value.bounded should contain theSameElementsAs
// List(
// Variable.create("w"),
// Variable.create("int")
// )
// }
// "CQ7" should "have a non-empty bounded set" in {
// ConjunctiveQuery.parse(cq7).value.bounded should contain theSameElementsAs
// List(
// Variable.create("w"),
// Variable.create("z"),
// Variable.create("u"),
// Variable.create("strat_unit_name"),
// Variable.create("wellbore"),
// Variable.create("cored_int"),
// Variable.create("c"),
// Variable.create("sample_depth"),
// Variable.create("p"),
// Variable.create("top"),
// Variable.create("bot")
// )
// }
}
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